Translating Research into Pre-Clinical Prototypes - CISTIB Portal

DISSEMINATIONDelivering Research

Software Tools & Skills for Translating Research into Pre-Clinical Prototypes Hands-on Course OCT 2014 University of Sheffield, Sheffield, UK Bridging the gap between world-class research and professional software development to deliver the next generation of computational imaging software prototypes for clinical translation Pam Liversidge Bldg Mappin St, S1 3JD Sheffield, UK Room: TBC		Key benefits Get advice on how to bring your VPH research project to life from top Academics and Software Professionals with extended experience in the area Experience the whole Software Development Life cycle from conception to validation, guided through a real use case. Learn basic Software Development Techniques that will make a whole difference Influence the Workshop content to meet your expectations
VPH Workflow A real use case will drive the workshop to experience the delivery of a true prototype using GIMIAS platformand going through: Segmentation: Creating patient specific 3D models from medical imaging. Personalization: Personalization of FEM mesh with patient specific information Post Processing: Execution of simulation using FEM as an input, and processing of the output Validation: Make prototype available and validation process. MySpine medical workflow executed in the VPH-Share infostructure Provided By : CISTIB team involved in VPH EU projects (VPH-Dare@IT, VPH-Share, MySpine) Alberto Biancardi, Ernesto Coto, Vigesh Rammonhan		Participants Space Daily specific slot for participants where: General questions will be addressed by Kitware and CISTIB Obtain technical assistance from Kitware and CITSTIB teams to progress on their personal projects Progress in the proposed VPH workflow A retrospective will be conducted to improve any aspect of the workshop Detailed and limited support session from Kitware & CISTIB can be booked upon request to: This email address is being protected from spambots. You need JavaScript enabled to view it.
Case Studies In this section the participant will have the opportunity to go through cases of studies were the researchers and developers involved will explain the challenge to implement their prototypes and how they manage to overcome them. @neurIST "Integrated Biomedical Informatics for the Management of Cerebral Aneurysms" Prof. Alejandro Frangi CISTIB MySpine: "Functional prognosis simulation of patient-specific spinal treatment for clinical use" Dr. Jose Pozo CISTIB VPH-DARE@IT: Virtual Physiological Human: DementiA Research Enabled by IT Dr. Helena Molina-Abril Dr. Leandro Beltrachini CISTIB		Software Training The participant will be introduced to: Best software engineering practice using CMake Image processing tools provided by ITK The image segmentation algorithms provided by ITK The VTK rendering and processing pipelines Use VTK for highlighting specific data aspect Integrate ITK and VTK as a Command Line Plugin in GIMIAS Jérôme Velut is an R&D Engineer at Kitware. He completed a PhD fellowship in medical imaging at the University of Rennes after his PhD in information processing from the INSA in Lyon.

Registration		Accomodation
For further information, please contact: This email address is being protected from spambots. You need JavaScript enabled to view it. Sarah Walther This email address is being protected from spambots. You need JavaScript enabled to view it. Phone: +44 114 222 6071 After registration: a guideline to prepare the workshop will be provided to all participants, including a specific form to describe their project/interests which will be used to accommodate the content of the workshop to the participant specific needs. About the City: About Sheffield Live in Sheffield Peak District Natural Park Sheffield: A City You'll Love		Information will be added soon.